{
  "_id": "6a218c5acd65a98ecbd385f9",
  "Package": "pfwim",
  "Title": "Food Web Construction for Paleo Communities",
  "Version": "1.0.2",
  "Authors@R": "c(\nperson(\"Tanya\", \"Strydom\", role = c(\"aut\", \"cre\"), email = \"t.strydom@sheffield.ac.uk\",\ncomment = c(ORCID = \"0000-0001-6067-1349\")),\nperson(\"Jack O.\", \"Shaw\", role = c(\"ctb\"),\ncomment = c(ORCID = \"0000-0002-2725-2334\")),\nperson(\"Alexander M.\", \"Dunhill\", role = \"ctb\",\ncomment = c(ORCID = \"0000-0002-8680-9163\")),\nperson(\"Andrew\", \"Beckerman\", role = \"ctb\",\ncomment = c(ORCID = \"0000-0002-4797-9143\")),\nperson(\"Baran\", \"Karapunar\", role = \"ctb\",\ncomment = c(ORCID = \"0000-0001-9711-1492\")),\nperson(\"Jennifer A.\", \"Dunne\", role = \"ctb\",\ncomment = c(ORCID = \"0000-0002-3789-9561\")),\nperson(\"Pincelli M.\", \"Hull\", role = \"ctb\",\ncomment = c(ORCID = \"0000-0001-8607-4817\"))\n)",
  "Description": "R tools for reconstructing paleo food webs from species\ntraits and size rules.",
  "License": "MIT + file LICENSE",
  "Encoding": "UTF-8",
  "Roxygen": "list(markdown = TRUE)",
  "RoxygenNote": "7.3.3",
  "LazyData": "true",
  "Config/testthat/edition": "3",
  "VignetteBuilder": "knitr",
  "URL": "https://beckslab.github.io/pfwim/,\nhttps://github.com/BecksLab/pfwim",
  "Config/pak/sysreqs": "libicu-dev",
  "Repository": "https://beckslab.r-universe.dev",
  "Date/Publication": "2026-06-04 11:53:56 UTC",
  "RemoteUrl": "https://github.com/beckslab/pfwim",
  "RemoteRef": "HEAD",
  "RemoteSha": "f1574173ec2a9aed1b4f6cd4b973535501cc57ea",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-06-04 14:28:19 UTC",
    "User": "root"
  },
  "Author": "Tanya Strydom [aut, cre] (ORCID:\n<https://orcid.org/0000-0001-6067-1349>),\nJack O. Shaw [ctb] (ORCID: <https://orcid.org/0000-0002-2725-2334>),\nAlexander M. Dunhill [ctb] (ORCID:\n<https://orcid.org/0000-0002-8680-9163>),\nAndrew Beckerman [ctb] (ORCID: <https://orcid.org/0000-0002-4797-9143>),\nBaran Karapunar [ctb] (ORCID: <https://orcid.org/0000-0001-9711-1492>),\nJennifer A. Dunne [ctb] (ORCID:\n<https://orcid.org/0000-0002-3789-9561>),\nPincelli M. Hull [ctb] (ORCID: <https://orcid.org/0000-0001-8607-4817>)",
  "Maintainer": "Tanya Strydom <t.strydom@sheffield.ac.uk>",
  "MD5sum": "5b79a1180906d0c914a11c337a514b25",
  "_user": "beckslab",
  "_type": "src",
  "_file": "pfwim_1.0.2.tar.gz",
  "_fileid": "3ee3e574e9b64c62c2e45c2dff8c91fdc272a2d992d11442b3ab9a12bbcb0aae",
  "_filesize": 1392773,
  "_sha256": "3ee3e574e9b64c62c2e45c2dff8c91fdc272a2d992d11442b3ab9a12bbcb0aae",
  "_created": "2026-06-04T14:28:19.000Z",
  "_published": "2026-06-04T14:31:54.374Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 79541144740,
      "time": 137,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7414197298"
    },
    {
      "job": 79541145121,
      "time": 157,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7414205447"
    },
    {
      "job": 79541144719,
      "time": 171,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7414198131"
    },
    {
      "job": 79541144685,
      "time": 159,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7414194214"
    },
    {
      "job": 79540438591,
      "time": 199,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7414138222"
    },
    {
      "job": 79541144826,
      "time": 110,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7414185621"
    },
    {
      "job": 79541144788,
      "time": 91,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7414177375"
    },
    {
      "job": 79541144780,
      "time": 76,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7414171275"
    },
    {
      "job": 79541144841,
      "time": 86,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7414175316"
    }
  ],
  "_buildurl": "https://github.com/r-universe/beckslab/actions/runs/26957993426",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/beckslab/pfwim",
  "_commit": {
    "id": "f1574173ec2a9aed1b4f6cd4b973535501cc57ea",
    "author": "Tanya Strydom <tanya.strydom@icloud.com>",
    "committer": "Tanya Strydom <tanya.strydom@icloud.com>",
    "message": "🌸 orcid f-up\n",
    "time": 1780574036
  },
  "_maintainer": {
    "name": "Tanya Strydom",
    "email": "t.strydom@sheffield.ac.uk",
    "login": "tanyas08",
    "bluesky": "@tanyadoesscience.bsky.social",
    "orcid": "0000-0001-6067-1349",
    "description": "Dinosaur web weaver at @BecksLab, former padawan @PoisotLab, and occasional data visualiser",
    "uuid": 61696728
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.5",
      "role": "Depends"
    },
    {
      "package": "dplyr",
      "role": "Imports"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "tibble",
      "role": "Imports"
    },
    {
      "package": "tidyr",
      "role": "Imports"
    },
    {
      "package": "tidyselect",
      "role": "Imports"
    },
    {
      "package": "igraph",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "version": ">= 3.0.0",
      "role": "Suggests"
    }
  ],
  "_owner": "beckslab",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-34",
      "n": 1
    },
    {
      "week": "2026-10",
      "n": 7
    },
    {
      "week": "2026-11",
      "n": 31
    },
    {
      "week": "2026-12",
      "n": 3
    },
    {
      "week": "2026-14",
      "n": 10
    },
    {
      "week": "2026-15",
      "n": 1
    },
    {
      "week": "2026-17",
      "n": 5
    },
    {
      "week": "2026-18",
      "n": 4
    },
    {
      "week": "2026-23",
      "n": 1
    }
  ],
  "_tags": [
    {
      "name": "v0.1-alpha",
      "date": "2025-08-19"
    },
    {
      "name": "v1.0.0",
      "date": "2026-04-02"
    },
    {
      "name": "V1.0.1",
      "date": "2026-04-25"
    },
    {
      "name": "V1.0.2",
      "date": "2026-04-25"
    },
    {
      "name": "V1.0.03",
      "date": "2026-06-04"
    }
  ],
  "_stars": 0,
  "_contributors": [
    {
      "user": "tanyas08",
      "count": 65,
      "uuid": 61696728
    },
    {
      "user": "cemacrr",
      "count": 7,
      "uuid": 39555892
    },
    {
      "user": "jackolivershaw",
      "count": 1,
      "uuid": 32178053
    }
  ],
  "_userbio": {
    "uuid": 93547161,
    "type": "organization",
    "name": "The Beckerman Lab",
    "description": "The Beckerman Lab Central Research Repository"
  },
  "_downloads": {
    "count": 471,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/pfwim"
  },
  "_devurl": "https://github.com/beckslab/pfwim",
  "_pkgdown": "https://beckslab.github.io/pfwim/",
  "_searchresults": 0,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/pfwim.html",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/beckslab/pfwim",
  "_realowner": "beckslab",
  "_cranurl": true,
  "_releases": [
    {
      "version": "1.0.2",
      "date": "2026-04-28"
    }
  ],
  "_exports": [
    "infer_edgelist",
    "powerlaw_prey"
  ],
  "_datasets": [
    {
      "name": "feeding_rules",
      "title": "Example feeding rules for 'traits'",
      "object": "feeding_rules",
      "class": [
        "data.frame"
      ],
      "fields": [
        "trait_type_resource",
        "trait_resource",
        "trait_type_consumer",
        "trait_consumer"
      ],
      "rows": 19,
      "table": true,
      "tojson": true
    },
    {
      "name": "traits",
      "title": "Example species traits data to infer feeding rules",
      "object": "traits",
      "class": [
        "data.frame"
      ],
      "fields": [
        "species",
        "motility",
        "habitat",
        "feeding",
        "size"
      ],
      "rows": 10,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "feeding_rules",
      "title": "Example feeding rules for 'traits'",
      "topics": [
        "feeding_rules"
      ]
    },
    {
      "page": "infer_edgelist",
      "title": "Infer trophic interactions using PFWIM trait rules",
      "topics": [
        "infer_edgelist"
      ]
    },
    {
      "page": "powerlaw_prey",
      "title": "Generate hypothetical realised webs using a power-law link distribution",
      "topics": [
        "powerlaw_prey"
      ]
    },
    {
      "page": "traits",
      "title": "Example species traits data to infer feeding rules",
      "topics": [
        "traits"
      ]
    }
  ],
  "_pkglogo": "https://github.com/beckslab/pfwim/raw/HEAD/man/figures/logo.png",
  "_readme": "https://github.com/beckslab/pfwim/raw/HEAD/README.md",
  "_rundeps": [
    "cli",
    "cpp11",
    "dplyr",
    "generics",
    "glue",
    "lifecycle",
    "magrittr",
    "pillar",
    "pkgconfig",
    "purrr",
    "R6",
    "rlang",
    "stringi",
    "stringr",
    "tibble",
    "tidyr",
    "tidyselect",
    "utf8",
    "vctrs",
    "withr"
  ],
  "_vignettes": [
    {
      "source": "pfwim_02_metawebs.Rmd",
      "filename": "pfwim_02_metawebs.html",
      "title": "Building a Metaweb",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction",
        "Inferring the Metaweb",
        "Converting the Edgelist to an igraph Network",
        "Visualising the Metaweb"
      ],
      "created": "2026-03-30 11:14:16",
      "modified": "2026-03-30 11:14:16",
      "commits": 1
    },
    {
      "source": "pfwim_03_realised_webs.Rmd",
      "filename": "pfwim_03_realised_webs.html",
      "title": "Generating Realised Food Webs",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction",
        "Generate the Metaweb",
        "Generating Multiple Realised Webs",
        "Creating a consensus Realised Web",
        "Visualising the Consensus Web",
        "Weighted Consensus Web"
      ],
      "created": "2026-03-30 11:14:16",
      "modified": "2026-03-30 11:14:16",
      "commits": 1
    },
    {
      "source": "pfwim_01_workflow.Rmd",
      "filename": "pfwim_01_workflow.html",
      "title": "PFWIM Workflow",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction",
        "Data Structure Requirements",
        "Taxon Trait Data (data)",
        "Feeding Rules (cat_combo_list)",
        "Infer Edgelist",
        "Generate Realised Webs with Power-Law",
        "Customizing the Power-Law Distribution"
      ],
      "created": "2026-03-30 11:14:16",
      "modified": "2026-03-30 12:03:31",
      "commits": 2
    },
    {
      "source": "pfwim_04_cont_size.Rmd",
      "filename": "pfwim_04_cont_size.html",
      "title": "Using Continuous Variables",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction",
        "Prepare Numerical Data",
        "Define the Size Rule Function",
        "Run Inference with Size Constraints"
      ],
      "created": "2026-03-30 12:16:38",
      "modified": "2026-04-25 10:02:21",
      "commits": 3
    }
  ],
  "_score": 5.556302500767288,
  "_indexed": true,
  "_nocasepkg": "pfwim",
  "_universes": [
    "beckslab",
    "tanyas08"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.0.2",
      "date": "2026-06-04T14:30:37.000Z",
      "distro": "noble",
      "commit": "f1574173ec2a9aed1b4f6cd4b973535501cc57ea",
      "fileid": "f83720ac3bc11de0314b89bd58d6f48cf3d6d0620a544077e2d6fcd1c0a90e28",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/beckslab/actions/runs/26957993426"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.0.2",
      "date": "2026-06-04T14:30:57.000Z",
      "distro": "noble",
      "commit": "f1574173ec2a9aed1b4f6cd4b973535501cc57ea",
      "fileid": "e90920fc793fea31ee454d0ce9b92d7e952cd426d34adfb703262406cdc0d746",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/beckslab/actions/runs/26957993426"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.0.2",
      "date": "2026-06-04T14:30:41.000Z",
      "commit": "f1574173ec2a9aed1b4f6cd4b973535501cc57ea",
      "fileid": "e79a011222edb76201e0432c0185d8ce07467cd56834ff57ce240dce9812b8a2",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/beckslab/actions/runs/26957993426"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "1.0.2",
      "date": "2026-06-04T14:30:31.000Z",
      "commit": "f1574173ec2a9aed1b4f6cd4b973535501cc57ea",
      "fileid": "c1cd44dfb52f4c9b4d24be465ee34b77426365c224c235e210bb038cc8df1f1a",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/beckslab/actions/runs/26957993426"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.0.2",
      "date": "2026-06-04T14:30:29.000Z",
      "commit": "f1574173ec2a9aed1b4f6cd4b973535501cc57ea",
      "fileid": "2333c523a6aab8ffc30db6ffc44c6e40d2a5588924af6db006080adb014b482c",
      "status": "success",
      "buildurl": "https://github.com/r-universe/beckslab/actions/runs/26957993426"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.0.2",
      "date": "2026-06-04T14:29:40.000Z",
      "commit": "f1574173ec2a9aed1b4f6cd4b973535501cc57ea",
      "fileid": "39a9afc625aa090f332db502e3aed9eb6996eca284cb126a2994978b225a20fc",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/beckslab/actions/runs/26957993426"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.0.2",
      "date": "2026-06-04T14:29:31.000Z",
      "commit": "f1574173ec2a9aed1b4f6cd4b973535501cc57ea",
      "fileid": "c796910d19804e6437303d738985aadc6d30ea784fbd4998520b4b9c188d444a",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/beckslab/actions/runs/26957993426"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "1.0.2",
      "date": "2026-06-04T14:29:41.000Z",
      "commit": "f1574173ec2a9aed1b4f6cd4b973535501cc57ea",
      "fileid": "98bd8ef39952cb02c0a479305359e4a29f834f5cb30277c9206d2a92b8b1e136",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/beckslab/actions/runs/26957993426"
    }
  ]
}